Information for motif1


Reverse Opposite:

p-value:1e-373
log p-value:-8.598e+02
Information Content per bp:1.734
Number of Target Sequences with motif219.0
Percentage of Target Sequences with motif5.74%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets105.9 +/- 51.2bp
Average Position of motif in Background94.9 +/- 46.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:CGGSCCCGCC---
-GGCCCCGCCCCC

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.76
Offset:2
Orientation:forward strand
Alignment:CGGSCCCGCC
--AGCGCGCC

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CGGSCCCGCC------
TACGCCCCGCCACTCTG

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CGGSCCCGCC----
NAGCCCCGCCCCCN

MA0516.1_SP2/Jaspar

Match Rank:5
Score:0.71
Offset:2
Orientation:forward strand
Alignment:CGGSCCCGCC-------
--GCCCCGCCCCCTCCC

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CGGSCCCGCC-----
TCGACCCCGCCCCTAT

PB0009.1_E2F3_1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CGGSCCCGCC-----
ANCGCGCGCCCTTNN

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CGGSCCCGCC-
-GGTCCCGCCC

PB0008.1_E2F2_1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CGGSCCCGCC-----
NTCGCGCGCCTTNNN

MA0079.3_SP1/Jaspar

Match Rank:10
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CGGSCCCGCC---
--GCCCCGCCCCC