Information for motif15


Reverse Opposite:

p-value:1e-97
log p-value:-2.235e+02
Information Content per bp:1.894
Number of Target Sequences with motif124.0
Percentage of Target Sequences with motif3.25%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets101.7 +/- 53.8bp
Average Position of motif in Background102.5 +/- 41.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----MCGSTGCG---
TCNCCTGCTGNGNNN

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----MCGSTGCG---
NNTCCTGCTGTGNNN

MA0048.1_NHLH1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---MCGSTGCG-
NCGCAGCTGCGN

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----MCGSTGCG---
TNTCCTGCTGTGNNG

PB0199.1_Zfp161_2/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--MCGSTGCG----
NNGCNCTGCGCGGC

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:MCGSTGCG
--GCTCCG

POL001.1_MTE/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----MCGSTGCG-------
NCGACCGCTCCGCTCGAAA

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----MCGSTGCG----
ATCCACAGGTGCGAAAA

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:MCGSTGCG
-NGCTN--

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:MCGSTGCG
--GCTGTG