Information for motif18


Reverse Opposite:

p-value:1e-79
log p-value:-1.836e+02
Information Content per bp:1.850
Number of Target Sequences with motif109.0
Percentage of Target Sequences with motif2.86%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets103.9 +/- 48.8bp
Average Position of motif in Background130.8 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GTWGCGRC-----
NNNNTTGGCGCCGANNN

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GTWGCGRC-----
NNNNTTGGCGCCGANNN

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTWGCGRC---
-TTGCAACATN

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GTWGCGRC---
TACCATAGCAACGGT

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GTWGCGRC---
CCGCATAGCAACGGA

PB0054.1_Rfx3_1/Jaspar

Match Rank:6
Score:0.57
Offset:-8
Orientation:forward strand
Alignment:--------GTWGCGRC-------
TGTGACCCTTAGCAACCGATTAA

YY1(Zf)/Promoter/Homer

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GTWGCGRC
CAAGATGGCGGC

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTWGCGRC
HACTTCCGGY

PB0036.1_Irf6_1/Jaspar

Match Rank:9
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GTWGCGRC---
NNNTTGGTTTCGNTNNN

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTWGCGRC--
SCCTAGCAACAG