Information for motif19


Reverse Opposite:

p-value:1e-72
log p-value:-1.679e+02
Information Content per bp:1.530
Number of Target Sequences with motif129.0
Percentage of Target Sequences with motif3.38%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets97.8 +/- 51.9bp
Average Position of motif in Background97.0 +/- 57.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGCGAGAGGCCG
TTGACCGAGAATTCC

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGCGAGAGGCCG
NNNACCGAGAGTNNN

MA0146.2_Zfx/Jaspar

Match Rank:3
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AGCGAGAGGCCG-------
-----CAGGCCNNGGCCNN

MA0024.2_E2F1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGCGAGAGGCCG
CGGGCGGGAGG---

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGCGAGAGGCCG
GNNACCGAGAATNNN

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AGCGAGAGGCCG
----CTAGGCCT

MA0527.1_ZBTB33/Jaspar

Match Rank:7
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------AGCGAGAGGCCG
NAGNTCTCGCGAGAN----

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.55
Offset:6
Orientation:forward strand
Alignment:AGCGAGAGGCCG--
------AGGCCTNG

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGCGAGAGGCCG
GGCGGGAARN--

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----AGCGAGAGGCCG
GTTCTCGCGAGANCC--