Information for motif20


Reverse Opposite:

p-value:1e-66
log p-value:-1.524e+02
Information Content per bp:1.810
Number of Target Sequences with motif206.0
Percentage of Target Sequences with motif5.40%
Number of Background Sequences with motif28.3
Percentage of Background Sequences with motif1.24%
Average Position of motif in Targets100.3 +/- 53.7bp
Average Position of motif in Background95.4 +/- 57.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:CACGTCAC
-ACGTCA-

CRE(bZIP)/Promoter/Homer

Match Rank:2
Score:0.82
Offset:-4
Orientation:forward strand
Alignment:----CACGTCAC
CGGTGACGTCAC

MA0093.2_USF1/Jaspar

Match Rank:3
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CACGTCAC-
GCCACGTGACC

E-box(HLH)/Promoter/Homer

Match Rank:4
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-CACGTCAC---
TCACGTGACCGG

USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CACGTCAC-
TCACGTGACC

MA0018.2_CREB1/Jaspar

Match Rank:6
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-CACGTCAC
TGACGTCA-

Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:7
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CACGTCAC
ACCACGTGAC

MA0526.1_USF2/Jaspar

Match Rank:8
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CACGTCAC-
GTCATGTGACC

CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CACGTCAC
CACGTGDC

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:10
Score:0.76
Offset:-8
Orientation:forward strand
Alignment:--------CACGTCAC------
GGAAGAGTCACGTGACCAATAC