Information for motif3


Reverse Opposite:

p-value:1e-233
log p-value:-5.367e+02
Information Content per bp:1.516
Number of Target Sequences with motif151.0
Percentage of Target Sequences with motif3.96%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets103.2 +/- 51.1bp
Average Position of motif in Background54.4 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCGGCGCAG
GGGGGCGGGGCC-

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCGGCGCAG
NGAAGC-------

MA0516.1_SP2/Jaspar

Match Rank:3
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GAAGCGGCGCAG
GGGNGGGGGCGGGGC--

MA0079.3_SP1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCGGCGCAG
GGGGGCGGGGC--

PB0199.1_Zfp161_2/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GAAGCGGCGCAG-----
---GCCGCGCAGTGCGT

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAAGCGGCGCAG
AGGGGGCGGGGCTG

MA0162.2_EGR1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCGGCGCAG-
GGCGGGGGCGGGGG

MA0048.1_NHLH1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GAAGCGGCGCAG
NCGCAGCTGCGN--

PB0010.1_Egr1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GAAGCGGCGCAG
ANTGCGGGGGCGGN-

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GAAGCGGCGCAG
NNTNNGGGGCGGNGNGN