Information for motif4


Reverse Opposite:

p-value:1e-201
log p-value:-4.649e+02
Information Content per bp:1.709
Number of Target Sequences with motif135.0
Percentage of Target Sequences with motif3.54%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets91.3 +/- 53.1bp
Average Position of motif in Background118.3 +/- 40.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0103.2_ZEB1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGCACCTCGGCG
CCTCACCTG----

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGCACCTCGGCG
TGACACCT-----

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CGCACCTCGGCG-
NNTNCGCACCTGTNGAN

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGCACCTCGGCG
NNCACCTGNN--

MA0048.1_NHLH1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CGCACCTCGGCG
NCGCAGCTGCGN-

PB0101.1_Zic1_1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGCACCTCGGCG--
CCCCCCCGGGGGNN

MA0009.1_T/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CGCACCTCGGCG
TTCACACCTAG---

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CGCACCTCGGCG-
NTGCCCTTGGGCGN

PB0013.1_Eomes_1/Jaspar

Match Rank:9
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------CGCACCTCGGCG
NNTTTTCACACCTTNNN-

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CGCACCTCGGCG
NNACTTACCTN----