Information for motif10


Reverse Opposite:

p-value:1e-24
log p-value:-5.696e+01
Information Content per bp:1.586
Number of Target Sequences with motif447.0
Percentage of Target Sequences with motif11.72%
Number of Background Sequences with motif3221.4
Percentage of Background Sequences with motif7.04%
Average Position of motif in Targets102.9 +/- 53.9bp
Average Position of motif in Background95.7 +/- 57.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-CACGTCRY-
TCACGTGACC

CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:CACGTCRY
CACGTGDC

MA0104.3_Mycn/Jaspar

Match Rank:3
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:CACGTCRY
CACGTGGC

c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer

Match Rank:4
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:CACGTCRY
CACGTGGN

BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:CACGTCRY
CACGTGNC

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:CACGTCRY
-ACGTCA-

n-Myc(HLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CACGTCRY-
CCACGTGGNN

MA0004.1_Arnt/Jaspar

Match Rank:8
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CACGTCRY
CACGTG--

Max(HLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CACGTCRY--
ACCACGTGGTNN

Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:10
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CACGTCRY
ACCACGTGAC