Information for motif11


Reverse Opposite:

p-value:1e-22
log p-value:-5.247e+01
Information Content per bp:1.869
Number of Target Sequences with motif77.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif230.2
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets99.5 +/- 51.2bp
Average Position of motif in Background99.0 +/- 62.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--AGATGGCGCC
CAAGATGGCGGC

MA0461.1_Atoh1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AGATGGCGCC
CAGATGGC---

MA0095.2_YY1/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AGATGGCGCC
CAAGATGGCGGC

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---AGATGGCGCC
AACAGATGGC---

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------AGATGGCGCC----
GCCASCAGGGGGCGCYVNNG

MA0139.1_CTCF/Jaspar

Match Rank:6
Score:0.69
Offset:-8
Orientation:forward strand
Alignment:--------AGATGGCGCC-
TGGCCACCAGGGGGCGCTA

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AGATGGCGCC-----
NNNNTTGGCGCCGANNN

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:8
Score:0.68
Offset:-8
Orientation:reverse strand
Alignment:--------AGATGGCGCC--
TGGCCACCAGGTGGCACTNT

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AGATGGCGCC-----
NNNNTTGGCGCCGANNN

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:10
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------AGATGGCGCC-
AAGGCCAGATGGTCCGG