Information for motif20


Reverse Opposite:

p-value:1e-4
log p-value:-1.094e+01
Information Content per bp:1.819
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif17.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets90.7 +/- 56.8bp
Average Position of motif in Background86.5 +/- 51.1bp
Strand Bias (log2 ratio + to - strand density)-2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0483.1_Gfi1b/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AGATAATCTCAG--
---AAATCACAGCA

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGATAATCTCAG
AGATAASR----

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AGATAATCTCAG-
---AAATCACTGC

MA0037.2_GATA3/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGATAATCTCAG
AGATAAGA----

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGATAATCTCAG
NAGATAAGNN---

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGATAATCTCAG
NBWGATAAGR----

MA0482.1_Gata4/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGATAATCTCAG
NNGAGATAAGA----

GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AGATAATCTCAG--
NNNNNBAGATAWYATCTVHN

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGATAATCTCAG
AAGATATCCTT--

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGATAATCTCAG
CAGATAAGGN---