Information for motif5


Reverse Opposite:

p-value:1e-112
log p-value:-2.584e+02
Information Content per bp:1.635
Number of Target Sequences with motif1003.0
Percentage of Target Sequences with motif26.29%
Number of Background Sequences with motif5804.5
Percentage of Background Sequences with motif12.68%
Average Position of motif in Targets99.8 +/- 51.9bp
Average Position of motif in Background92.0 +/- 58.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCGCCCMCY
NAGCCCCGCCCCCN

MA0079.3_SP1/Jaspar

Match Rank:2
Score:0.95
Offset:0
Orientation:forward strand
Alignment:GCCCCGCCCMCY
GCCCCGCCCCC-

MA0516.1_SP2/Jaspar

Match Rank:3
Score:0.93
Offset:0
Orientation:forward strand
Alignment:GCCCCGCCCMCY---
GCCCCGCCCCCTCCC

MA0599.1_KLF5/Jaspar

Match Rank:4
Score:0.93
Offset:0
Orientation:forward strand
Alignment:GCCCCGCCCMCY
GCCCCGCCCC--

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-GCCCCGCCCMCY
GGCCCCGCCCCC-

MA0039.2_Klf4/Jaspar

Match Rank:6
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:GCCCCGCCCMCY
GCCCCACCCA--

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:GCCCCGCCCMCY
GCCMCRCCCH--

PB0039.1_Klf7_1/Jaspar

Match Rank:8
Score:0.88
Offset:-3
Orientation:forward strand
Alignment:---GCCCCGCCCMCY-
TCGACCCCGCCCCTAT

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-GCCCCGCCCMCY----
GGTCCCGCCCCCTTCTC

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-GCCCCGCCCMCY---
ATCCCCGCCCCTAAAA