Information for motif8


Reverse Opposite:

p-value:1e-40
log p-value:-9.245e+01
Information Content per bp:1.631
Number of Target Sequences with motif289.0
Percentage of Target Sequences with motif7.58%
Number of Background Sequences with motif1437.6
Percentage of Background Sequences with motif3.14%
Average Position of motif in Targets100.3 +/- 50.1bp
Average Position of motif in Background86.7 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.94
Offset:1
Orientation:forward strand
Alignment:CAGCCAATCAGA
-AGCCAATCGG-

MA0502.1_NFYB/Jaspar

Match Rank:2
Score:0.93
Offset:-4
Orientation:forward strand
Alignment:----CAGCCAATCAGA
AAATGGACCAATCAG-

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--CAGCCAATCAGA
ACTAGCCAATCA--

MA0060.2_NFYA/Jaspar

Match Rank:4
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCAATCAGA-----
TGGACCAATCAGCACTCT

MA0161.1_NFIC/Jaspar

Match Rank:5
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CAGCCAATCAGA
-TGCCAA-----

PH0026.1_Duxbl/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CAGCCAATCAGA----
CGACCCAATCAACGGTG

MA0038.1_Gfi1/Jaspar

Match Rank:7
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CAGCCAATCAGA-
---CAAATCACTG

PH0005.1_Barhl1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAGCCAATCAGA--
AACAACCAATTAATTC

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAGCCAATCAGA
NCTGTCAATCAN-

PH0089.1_Isx/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCAATCAGA---
ACNNCTAATTAGNNNN