Information for motif9


Reverse Opposite:

p-value:1e-36
log p-value:-8.376e+01
Information Content per bp:1.876
Number of Target Sequences with motif433.0
Percentage of Target Sequences with motif11.35%
Number of Background Sequences with motif2712.3
Percentage of Background Sequences with motif5.93%
Average Position of motif in Targets100.6 +/- 51.9bp
Average Position of motif in Background100.3 +/- 58.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:1
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:GACATTCC---
-RCATTCCWGG

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:GACATTCC---
-GCATTCCAGN

MA0090.1_TEAD1/Jaspar

Match Rank:3
Score:0.85
Offset:0
Orientation:forward strand
Alignment:GACATTCC----
CACATTCCTCCG

NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer

Match Rank:4
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GACATTCC-
GGAAATTCCC

MA0101.1_REL/Jaspar

Match Rank:5
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--GACATTCC
GGGGATTTCC

MA0107.1_RELA/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GACATTCC-
GGAAATTCCC

MA0105.3_NFKB1/Jaspar

Match Rank:7
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GACATTCC-
GGGAAATTCCC

MA0081.1_SPIB/Jaspar

Match Rank:8
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:GACATTCC---
----TTCCTCT

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:9
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GACATTCC-
NGGGGATTTCCC

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GACATTCC
GGGGATTTCC