Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 3814)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 45831)	% of Background Sequences with Motif
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-124	-2.865e+02	0.0000	304.0	7.97%	650.8	1.42%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e-123	-2.855e+02	0.0000	639.0	16.75%	2675.2	5.85%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e-122	-2.828e+02	0.0000	549.0	14.39%	2070.7	4.52%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e-115	-2.662e+02	0.0000	641.0	16.80%	2810.0	6.14%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e-108	-2.508e+02	0.0000	484.0	12.69%	1807.7	3.95%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-107	-2.469e+02	0.0000	390.0	10.22%	1237.6	2.70%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e-104	-2.406e+02	0.0000	451.0	11.82%	1644.7	3.59%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e-104	-2.398e+02	0.0000	782.0	20.50%	4100.5	8.96%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e-102	-2.359e+02	0.0000	505.0	13.24%	2030.6	4.44%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e-78	-1.814e+02	0.0000	304.0	7.97%	1006.7	2.20%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e-78	-1.804e+02	0.0000	548.0	14.36%	2722.9	5.95%
Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e-77	-1.783e+02	0.0000	585.0	15.33%	3031.0	6.62%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e-52	-1.217e+02	0.0000	117.0	3.07%	222.9	0.49%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e-52	-1.207e+02	0.0000	831.0	21.78%	5860.1	12.81%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e-51	-1.191e+02	0.0000	1096.0	28.73%	8502.7	18.58%
HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e-46	-1.081e+02	0.0000	352.0	9.23%	1792.3	3.92%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e-46	-1.074e+02	0.0000	490.0	12.84%	2930.3	6.40%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e-46	-1.069e+02	0.0000	715.0	18.74%	4964.2	10.85%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer	CTGTTTAC	1e-40	-9.328e+01	0.0000	888.0	23.28%	6871.3	15.02%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-40	-9.324e+01	0.0000	530.0	13.89%	3452.4	7.54%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-38	-8.974e+01	0.0000	884.0	23.17%	6897.4	15.07%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-38	-8.947e+01	0.0000	660.0	17.30%	4709.1	10.29%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-36	-8.347e+01	0.0000	511.0	13.39%	3412.1	7.46%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-36	-8.330e+01	0.0000	343.0	8.99%	1951.7	4.26%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-35	-8.159e+01	0.0000	764.0	20.03%	5852.4	12.79%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-34	-7.875e+01	0.0000	480.0	12.58%	3196.3	6.98%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-34	-7.839e+01	0.0000	674.0	17.67%	5027.8	10.99%
Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e-33	-7.825e+01	0.0000	446.0	11.69%	2897.2	6.33%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e-31	-7.347e+01	0.0000	480.0	12.58%	3272.0	7.15%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-30	-6.939e+01	0.0000	901.0	23.62%	7489.6	16.37%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e-27	-6.246e+01	0.0000	799.0	20.94%	6593.9	14.41%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-24	-5.568e+01	0.0000	388.0	10.17%	2692.0	5.88%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e-24	-5.535e+01	0.0000	407.0	10.67%	2873.1	6.28%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e-23	-5.317e+01	0.0000	145.0	3.80%	670.3	1.46%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-22	-5.294e+01	0.0000	142.0	3.72%	650.9	1.42%
TR4(NR/DR1)/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e-22	-5.289e+01	0.0000	121.0	3.17%	503.9	1.10%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e-22	-5.237e+01	0.0000	290.0	7.60%	1858.0	4.06%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-22	-5.075e+01	0.0000	282.0	7.39%	1808.6	3.95%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e-20	-4.803e+01	0.0000	213.0	5.58%	1250.5	2.73%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e-20	-4.798e+01	0.0000	522.0	13.68%	4113.4	8.99%
Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e-20	-4.792e+01	0.0000	187.0	4.90%	1038.4	2.27%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e-20	-4.748e+01	0.0000	333.0	8.73%	2313.8	5.06%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-20	-4.743e+01	0.0000	273.0	7.16%	1773.7	3.88%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e-19	-4.453e+01	0.0000	1503.0	39.40%	14817.9	32.38%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-19	-4.423e+01	0.0000	657.0	17.22%	5564.4	12.16%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e-18	-4.282e+01	0.0000	168.0	4.40%	937.0	2.05%
PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e-18	-4.156e+01	0.0000	512.0	13.42%	4152.4	9.07%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-16	-3.691e+01	0.0000	292.0	7.65%	2105.8	4.60%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e-14	-3.383e+01	0.0000	88.0	2.31%	400.2	0.87%
GFY-Staf/Promoters/Homer	RACTACAATTCCCAGAAKGC	1e-14	-3.382e+01	0.0000	68.0	1.78%	263.2	0.58%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e-14	-3.297e+01	0.0000	91.0	2.39%	428.8	0.94%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e-13	-3.198e+01	0.0000	1025.0	26.87%	9904.2	21.64%
GATA:SCL/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e-13	-3.075e+01	0.0000	81.0	2.12%	372.6	0.81%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-13	-3.020e+01	0.0000	279.0	7.31%	2103.9	4.60%
USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e-12	-2.986e+01	0.0000	232.0	6.08%	1666.7	3.64%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-12	-2.934e+01	0.0000	530.0	13.89%	4646.1	10.15%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e-12	-2.917e+01	0.0000	318.0	8.34%	2501.4	5.47%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-12	-2.865e+01	0.0000	383.0	10.04%	3158.8	6.90%
RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e-12	-2.840e+01	0.0000	593.0	15.54%	5336.5	11.66%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e-11	-2.747e+01	0.0000	752.0	19.71%	7073.9	15.46%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-10	-2.470e+01	0.0000	105.0	2.75%	613.2	1.34%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e-10	-2.460e+01	0.0000	974.0	25.53%	9637.2	21.06%
CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e-10	-2.308e+01	0.0000	249.0	6.53%	1957.2	4.28%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e-9	-2.268e+01	0.0000	53.0	1.39%	230.5	0.50%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e-9	-2.263e+01	0.0000	178.0	4.67%	1288.3	2.82%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-9	-2.225e+01	0.0000	300.0	7.86%	2481.1	5.42%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e-9	-2.181e+01	0.0000	158.0	4.14%	1117.5	2.44%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e-9	-2.128e+01	0.0000	63.0	1.65%	313.3	0.68%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e-9	-2.108e+01	0.0000	146.0	3.83%	1019.3	2.23%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e-8	-2.028e+01	0.0000	86.0	2.25%	505.7	1.10%
NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e-8	-2.024e+01	0.0000	429.0	11.25%	3866.1	8.45%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e-8	-1.999e+01	0.0000	816.0	21.39%	8080.5	17.66%
SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-8	-1.979e+01	0.0000	1986.0	52.06%	21653.8	47.32%
NRF1/Promoter/Homer	STGCGCATGCGC	1e-8	-1.957e+01	0.0000	157.0	4.12%	1146.2	2.50%
bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e-8	-1.955e+01	0.0000	156.0	4.09%	1137.4	2.49%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e-8	-1.882e+01	0.0000	69.0	1.81%	382.2	0.84%
Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e-8	-1.861e+01	0.0000	116.0	3.04%	786.5	1.72%
E-box(HLH)/Promoter/Homer	SSGGTCACGTGA	1e-7	-1.842e+01	0.0000	66.0	1.73%	362.8	0.79%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e-7	-1.841e+01	0.0000	114.0	2.99%	771.5	1.69%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e-7	-1.824e+01	0.0000	71.0	1.86%	404.7	0.88%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e-7	-1.808e+01	0.0000	387.0	10.14%	3495.1	7.64%
OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e-7	-1.783e+01	0.0000	48.0	1.26%	229.4	0.50%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e-7	-1.684e+01	0.0000	20.0	0.52%	53.5	0.12%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e-7	-1.621e+01	0.0000	58.0	1.52%	320.7	0.70%
Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e-6	-1.590e+01	0.0000	75.0	1.97%	464.4	1.01%
Max(HLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e-6	-1.574e+01	0.0000	257.0	6.74%	2217.1	4.84%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e-6	-1.523e+01	0.0000	365.0	9.57%	3360.7	7.34%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	MACAGGAAGT	1e-6	-1.502e+01	0.0000	150.0	3.93%	1167.4	2.55%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e-5	-1.374e+01	0.0000	311.0	8.15%	2842.0	6.21%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e-5	-1.368e+01	0.0000	238.0	6.24%	2082.9	4.55%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e-5	-1.270e+01	0.0000	337.0	8.83%	3155.2	6.89%
c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer	VCCACGTG	1e-5	-1.260e+01	0.0000	233.0	6.11%	2063.8	4.51%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e-5	-1.235e+01	0.0000	68.0	1.78%	450.8	0.99%
NF1:FOXA1/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e-5	-1.168e+01	0.0000	26.0	0.68%	115.9	0.25%
Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-5	-1.156e+01	0.0000	590.0	15.47%	5979.1	13.07%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e-5	-1.151e+01	0.0000	301.0	7.89%	2816.1	6.15%
Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e-4	-1.137e+01	0.0000	126.0	3.30%	1014.0	2.22%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-4	-1.044e+01	0.0001	357.0	9.36%	3465.0	7.57%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-4	-1.041e+01	0.0001	1296.0	33.97%	14155.7	30.93%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e-4	-1.039e+01	0.0001	274.0	7.18%	2571.8	5.62%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e-4	-1.034e+01	0.0001	284.0	7.44%	2680.6	5.86%
Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e-4	-1.015e+01	0.0001	511.0	13.39%	5175.7	11.31%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e-4	-1.012e+01	0.0001	124.0	3.25%	1023.1	2.24%
n-Myc(HLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e-4	-1.007e+01	0.0001	267.0	7.00%	2509.7	5.48%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-4	-1.003e+01	0.0001	732.0	19.19%	7671.6	16.76%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e-4	-9.898e+00	0.0001	499.0	13.08%	5055.1	11.05%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-4	-9.725e+00	0.0001	211.0	5.53%	1928.9	4.22%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e-4	-9.625e+00	0.0002	627.0	16.44%	6507.7	14.22%
FOXA1:AR/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e-4	-9.422e+00	0.0002	19.0	0.50%	81.9	0.18%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e-4	-9.259e+00	0.0002	135.0	3.54%	1156.5	2.53%
BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e-3	-9.004e+00	0.0003	567.0	14.86%	5869.6	12.83%
Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e-3	-8.960e+00	0.0003	1162.0	30.46%	12709.1	27.77%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e-3	-8.845e+00	0.0003	166.0	4.35%	1487.3	3.25%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e-3	-8.823e+00	0.0003	235.0	6.16%	2216.7	4.84%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e-3	-8.803e+00	0.0003	179.0	4.69%	1624.9	3.55%
MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e-3	-8.763e+00	0.0003	532.0	13.94%	5490.2	12.00%
GATA-DR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e-3	-8.729e+00	0.0003	27.0	0.71%	146.8	0.32%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e-3	-8.663e+00	0.0004	367.0	9.62%	3658.1	7.99%
Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e-3	-8.659e+00	0.0004	43.0	1.13%	282.0	0.62%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e-3	-7.875e+00	0.0008	561.0	14.71%	5874.8	12.84%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	GCTGTGGTTW	1e-3	-7.857e+00	0.0008	261.0	6.84%	2537.9	5.55%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e-3	-7.825e+00	0.0008	486.0	12.74%	5031.5	10.99%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e-3	-7.636e+00	0.0010	1331.0	34.89%	14809.3	32.36%
GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e-3	-7.635e+00	0.0010	38.0	1.00%	251.3	0.55%
ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e-3	-7.281e+00	0.0014	58.0	1.52%	441.0	0.96%
E2F(E2F)/Cell-Cycle-Exp/Homer	TTSGCGCGAAAA	1e-3	-7.275e+00	0.0014	40.0	1.05%	274.7	0.60%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e-3	-7.165e+00	0.0015	48.0	1.26%	349.6	0.76%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e-3	-7.077e+00	0.0016	78.0	2.04%	640.0	1.40%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e-3	-6.916e+00	0.0019	976.0	25.58%	10722.1	23.43%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e-2	-6.444e+00	0.0030	559.0	14.65%	5953.3	13.01%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-2	-6.411e+00	0.0031	23.0	0.60%	137.4	0.30%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e-2	-6.323e+00	0.0033	1194.0	31.30%	13330.7	29.13%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e-2	-6.140e+00	0.0040	114.0	2.99%	1034.2	2.26%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e-2	-6.028e+00	0.0044	657.0	17.22%	7109.9	15.54%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e-2	-6.027e+00	0.0044	110.0	2.88%	996.0	2.18%
CTCF-SatelliteElement/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e-2	-5.888e+00	0.0050	12.0	0.31%	55.1	0.12%
GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e-2	-5.855e+00	0.0051	24.0	0.63%	152.3	0.33%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e-2	-5.470e+00	0.0075	340.0	8.91%	3541.6	7.74%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-2	-5.340e+00	0.0085	97.0	2.54%	883.7	1.93%
Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e-2	-5.265e+00	0.0091	81.0	2.12%	719.9	1.57%
E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e-2	-5.120e+00	0.0104	687.0	18.01%	7537.2	16.47%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e-2	-5.028e+00	0.0113	441.0	11.56%	4717.3	10.31%
Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e-2	-4.934e+00	0.0124	85.0	2.23%	771.5	1.69%
Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e-2	-4.677e+00	0.0159	21.0	0.55%	141.5	0.31%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e-1	-4.546e+00	0.0180	191.0	5.01%	1934.1	4.23%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e-1	-4.525e+00	0.0183	13.0	0.34%	74.4	0.16%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e-1	-4.367e+00	0.0212	91.0	2.39%	854.9	1.87%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e-1	-4.317e+00	0.0222	243.0	6.37%	2527.3	5.52%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e-1	-4.303e+00	0.0223	565.0	14.81%	6205.7	13.56%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-1	-4.284e+00	0.0226	23.0	0.60%	165.4	0.36%
MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e-1	-4.046e+00	0.0285	399.0	10.46%	4318.9	9.44%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e-1	-4.039e+00	0.0285	93.0	2.44%	888.6	1.94%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e-1	-3.953e+00	0.0309	149.0	3.91%	1502.7	3.28%
GATA-DR8(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e-1	-3.820e+00	0.0350	17.0	0.45%	117.0	0.26%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-1	-3.785e+00	0.0360	62.0	1.63%	568.3	1.24%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e-1	-3.588e+00	0.0436	108.0	2.83%	1070.3	2.34%
Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e-1	-3.558e+00	0.0446	59.0	1.55%	544.5	1.19%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e-1	-3.466e+00	0.0486	184.0	4.82%	1920.2	4.20%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e-1	-3.344e+00	0.0546	180.0	4.72%	1883.5	4.12%
c-Myc/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e-1	-3.337e+00	0.0546	159.0	4.17%	1648.9	3.60%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e-1	-3.271e+00	0.0580	364.0	9.54%	3986.5	8.71%
NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e-1	-3.032e+00	0.0732	47.0	1.23%	435.7	0.95%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e-1	-3.018e+00	0.0738	307.0	8.05%	3354.5	7.33%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e-1	-2.708e+00	0.1000	110.0	2.88%	1138.1	2.49%
CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e-1	-2.637e+00	0.1067	142.0	3.72%	1502.7	3.28%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	ATTTTCCATT	1e-1	-2.604e+00	0.1097	210.0	5.50%	2279.0	4.98%
PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e-1	-2.597e+00	0.1098	146.0	3.83%	1550.3	3.39%
PAX5-shortForm(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e-1	-2.470e+00	0.1239	43.0	1.13%	412.3	0.90%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e-1	-2.313e+00	0.1441	142.0	3.72%	1525.6	3.33%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer	GYCATCMATCAT	1e0	-2.278e+00	0.1483	23.0	0.60%	206.8	0.45%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-2.248e+00	0.1520	679.0	17.80%	7790.9	17.02%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	-2.240e+00	0.1523	16.0	0.42%	135.9	0.30%
E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-2.210e+00	0.1560	620.0	16.25%	7101.6	15.52%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-2.135e+00	0.1672	43.0	1.13%	425.5	0.93%
LXRE(NR/DR4)/BLRP(RAW)-LXRb-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-1.917e+00	0.2066	19.0	0.50%	174.1	0.38%
HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-1.892e+00	0.2108	91.0	2.39%	975.3	2.13%
PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-1.832e+00	0.2224	41.0	1.07%	416.3	0.91%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-1.817e+00	0.2245	180.0	4.72%	2004.2	4.38%
Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-1.701e+00	0.2508	136.0	3.56%	1506.8	3.29%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-1.673e+00	0.2566	68.0	1.78%	728.1	1.59%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-1.635e+00	0.2651	86.0	2.25%	936.7	2.05%
RBPJ:Ebox/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-1.609e+00	0.2705	130.0	3.41%	1445.9	3.16%
BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer	NHAACBGYYV	1e0	-1.534e+00	0.2900	502.0	13.16%	5822.0	12.72%
TRa(NR)/C17.2-TRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-1.489e+00	0.3015	170.0	4.46%	1922.3	4.20%
NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer	GGGGGAATCCCC	1e0	-1.471e+00	0.3054	48.0	1.26%	513.4	1.12%
STAT6/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-1.458e+00	0.3078	139.0	3.64%	1564.2	3.42%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer	TBGCACGCAA	1e0	-1.423e+00	0.3169	228.0	5.98%	2609.4	5.70%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-1.397e+00	0.3235	128.0	3.36%	1442.1	3.15%
PAX5(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-1.369e+00	0.3312	146.0	3.83%	1655.9	3.62%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-1.336e+00	0.3402	7.0	0.18%	62.1	0.14%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer	CCATATATGGNM	1e0	-1.279e+00	0.3585	79.0	2.07%	883.4	1.93%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-1.254e+00	0.3657	757.0	19.84%	8909.4	19.47%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-1.244e+00	0.3674	28.0	0.73%	298.3	0.65%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-1.222e+00	0.3737	25.0	0.66%	265.9	0.58%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-1.205e+00	0.3780	636.0	16.67%	7480.6	16.35%
NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer	GGAAATTCCC	1e0	-1.122e+00	0.4086	18.0	0.47%	190.9	0.42%
FXR(NR/IR1)/Liver-FXR-ChIP-Seq(Chong et al.)/Homer	AGGTCANTGACCTB	1e0	-1.070e+00	0.4284	148.0	3.88%	1714.8	3.75%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-1.047e+00	0.4360	159.0	4.17%	1847.9	4.04%
T1ISRE(IRF)/Ifnb-Exp/Homer	ACTTTCGTTTCT	1e0	-1.034e+00	0.4395	2.0	0.05%	15.3	0.03%
EBNA1(EBV virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	-1.002e+00	0.4518	7.0	0.18%	70.5	0.15%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-9.962e-01	0.4520	180.0	4.72%	2103.9	4.60%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-9.897e-01	0.4526	106.0	2.78%	1228.8	2.69%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-9.611e-01	0.4635	654.0	17.14%	7758.0	16.95%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-9.017e-01	0.4895	60.0	1.57%	694.6	1.52%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-7.480e-01	0.5680	24.0	0.63%	280.1	0.61%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-7.358e-01	0.5721	107.0	2.80%	1273.8	2.78%
ERE(NR/IR3)/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-6.480e-01	0.6217	90.0	2.36%	1082.6	2.37%
GRE(NR/IR3)/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-5.960e-01	0.6517	36.0	0.94%	437.9	0.96%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer	CYAAAAATAG	1e0	-5.815e-01	0.6581	76.0	1.99%	923.7	2.02%
GRE/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-5.494e-01	0.6762	62.0	1.63%	758.8	1.66%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-5.139e-01	0.6974	123.0	3.22%	1504.1	3.29%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-5.134e-01	0.6974	327.0	8.57%	3970.4	8.68%
ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER	AGTTTCASTTTC	1e0	-5.048e-01	0.6974	10.0	0.26%	127.0	0.28%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-4.761e-01	0.7141	50.0	1.31%	622.2	1.36%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-4.681e-01	0.7165	553.0	14.50%	6713.4	14.67%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-4.636e-01	0.7165	107.0	2.80%	1320.0	2.88%
ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-4.449e-01	0.7265	940.0	24.64%	11386.4	24.88%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-4.237e-01	0.7387	42.0	1.10%	531.9	1.16%
CHR/Cell-Cycle-Exp/Homer	SRGTTTCAAA	1e0	-4.192e-01	0.7387	109.0	2.86%	1354.1	2.96%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-3.849e-01	0.7609	19.0	0.50%	249.6	0.55%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-3.612e-01	0.7757	669.0	17.54%	8166.3	17.85%
ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-3.074e-01	0.8148	24.0	0.63%	322.8	0.71%
Reverb(NR/DR2)/BLRP(RAW)-Reverba-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-2.900e-01	0.8254	42.0	1.10%	553.6	1.21%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-2.870e-01	0.8254	681.0	17.85%	8357.5	18.26%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-2.799e-01	0.8264	145.0	3.80%	1835.6	4.01%
VDR(NR/DR3)/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-2.555e-01	0.8431	58.0	1.52%	762.3	1.67%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-2.539e-01	0.8431	82.0	2.15%	1063.0	2.32%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-2.513e-01	0.8431	980.0	25.69%	11999.3	26.22%
bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-2.326e-01	0.8513	70.0	1.83%	919.4	2.01%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-1.890e-01	0.8854	90.0	2.36%	1185.7	2.59%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-1.882e-01	0.8854	8.0	0.21%	127.3	0.28%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-1.595e-01	0.9040	238.0	6.24%	3042.9	6.65%
HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-1.311e-01	0.9261	102.0	2.67%	1364.0	2.98%
GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-1.075e-01	0.9442	37.0	0.97%	538.9	1.18%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-1.074e-01	0.9442	719.0	18.85%	8992.6	19.65%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-9.576e-02	0.9472	395.0	10.35%	5040.8	11.02%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-9.530e-02	0.9472	52.0	1.36%	741.9	1.62%
Pax7-longest(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-7.837e-02	0.9557	1.0	0.03%	31.0	0.07%
Pax7-long(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	-6.592e-02	0.9636	1.0	0.03%	33.3	0.07%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-4.527e-02	0.9796	169.0	4.43%	2293.5	5.01%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-3.203e-02	0.9845	16.0	0.42%	290.8	0.64%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-3.203e-02	0.9845	16.0	0.42%	290.8	0.64%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-2.360e-02	0.9887	1397.0	36.62%	17466.1	38.17%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-1.371e-02	0.9945	38.0	1.00%	633.9	1.39%
Mouse_Recombination_Hotspot/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-6.844e-03	0.9972	6.0	0.16%	164.7	0.36%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-1.000e-06	1.0000	29.0	0.76%	750.1	1.64%