Information for motif1


Reverse Opposite:

p-value:1e-493
log p-value:-1.136e+03
Information Content per bp:1.845
Number of Target Sequences with motif3291.0
Percentage of Target Sequences with motif31.17%
Number of Background Sequences with motif1123.7
Percentage of Background Sequences with motif13.27%
Average Position of motif in Targets99.9 +/- 53.1bp
Average Position of motif in Background99.5 +/- 61.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:1
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-AGTAAACA---
NDGTAAACARRN

MA0593.1_FOXP2/Jaspar

Match Rank:2
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-AGTAAACA--
AAGTAAACAAA

MA0031.1_FOXD1/Jaspar

Match Rank:3
Score:0.97
Offset:1
Orientation:forward strand
Alignment:AGTAAACA-
-GTAAACAT

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:4
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:AGTAAACA-
-GTAAACAG

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--AGTAAACA
AAAGTAAACA

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:6
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--AGTAAACA--
TATGTAAACANG

MA0480.1_Foxo1/Jaspar

Match Rank:7
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:AGTAAACA---
TGTAAACAGGA

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:8
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--AGTAAACA
AAAGTAAACA

MA0157.1_FOXO3/Jaspar

Match Rank:9
Score:0.92
Offset:0
Orientation:forward strand
Alignment:AGTAAACA
TGTAAACA

MA0148.3_FOXA1/Jaspar

Match Rank:10
Score:0.92
Offset:-3
Orientation:reverse strand
Alignment:---AGTAAACA----
CAAAGTAAACANNNN