| p-value: | 1e-15 |
| log p-value: | -3.656e+01 |
| Information Content per bp: | 1.837 |
| Number of Target Sequences with motif | 195.0 |
| Percentage of Target Sequences with motif | 1.85% |
| Number of Background Sequences with motif | 377.2 |
| Percentage of Background Sequences with motif | 0.97% |
| Average Position of motif in Targets | 98.5 +/- 51.6bp |
| Average Position of motif in Background | 102.3 +/- 54.0bp |
| Strand Bias (log2 ratio + to - strand density) | -0.1 |
| Multiplicity (# of sites on avg that occur together) | 1.14 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 1 |
| Score: | 0.87
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CCATGGAAAC-
TTGCCATGGCAACN |
|
|
|
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 2 |
| Score: | 0.87
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CCATGGAAAC-
TTGCCATGGCAACC |
|
|
|
MA0509.1_Rfx1/Jaspar
| Match Rank: | 3 |
| Score: | 0.85
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----CCATGGAAAC
GTTGCCATGGCAAC |
|
|
|
MA0600.1_RFX2/Jaspar
| Match Rank: | 4 |
| Score: | 0.83
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----CCATGGAAAC-----
GTTGCCATGGCAACCGCGG |
|
|
|
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
| Match Rank: | 5 |
| Score: | 0.81
| | Offset: | -5
| | Orientation: | reverse strand |
| Alignment: | -----CCATGGAAAC
KGTTGCCATGGCAAC |
|
|
|
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
| Match Rank: | 6 |
| Score: | 0.79
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----CCATGGAAAC--
GTTGCCATGGCAACCG |
|
|
|
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
| Match Rank: | 7 |
| Score: | 0.76
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | CCATGGAAAC--
SCCTAGCAACAG |
|
|
|
MA0510.1_RFX5/Jaspar
| Match Rank: | 8 |
| Score: | 0.75
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --CCATGGAAAC---
CTCCCTGGCAACAGC |
|
|
|
PB0055.1_Rfx4_1/Jaspar
| Match Rank: | 9 |
| Score: | 0.75
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --CCATGGAAAC---
TACCATAGCAACGGT |
|
|
|
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer
| Match Rank: | 10 |
| Score: | 0.71
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | CCATGGAAAC-
-AATGGAAAAT |
|
|
|
