Information for motif23


Reverse Opposite:

p-value:1e-12
log p-value:-2.887e+01
Information Content per bp:1.948
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets96.7 +/- 56.6bp
Average Position of motif in Background61.6 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0197.1_Zfp105_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCATCAGTAA-----
ATGGTTCAATAATTTTG

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCATCAGTAA
ATTGCATCAK---

PB0144.1_Lef1_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCATCAGTAA----
GAAGATCAATCACTTA

PH0150.1_Pou4f3/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCATCAGTAA-----
GACNTCATTAATAANN

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCATCAGTAA
ATTGCATCAT---

PH0134.1_Pbx1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCATCAGTAA---
TCACCCATCAATAAACA

PB0176.1_Sox5_2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCATCAGTAA---
TATCATAATTAAGGA

MA0124.1_NKX3-1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCATCAGTAA
---TAAGTAT

MA0032.1_FOXC1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCATCAGTAA
-GGTAAGTA-

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCATCAGTAA----
GAAGATCAATCACTAA