Information for motif25


Reverse Opposite:

p-value:1e-10
log p-value:-2.445e+01
Information Content per bp:1.879
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets90.2 +/- 61.9bp
Average Position of motif in Background79.9 +/- 41.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--ATCAATACCG
DGATCRATAN--

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----ATCAATACCG--
GAAGATCAATCACTAA

PB0144.1_Lef1_2/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----ATCAATACCG--
GAAGATCAATCACTTA

PH0134.1_Pbx1/Jaspar

Match Rank:4
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------ATCAATACCG-
TCACCCATCAATAAACA

Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATCAATACCG
TAATCAATTA--

MA0077.1_SOX9/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATCAATACCG
GAACAATGG--

MA0087.1_Sox5/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATCAATACCG
NAACAAT----

MF0010.1_Homeobox_class/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATCAATACCG
AATTATT----

MA0151.1_ARID3A/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATCAATACCG
ATTAAA----

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATCAATACCG
-YCATTAMC-