Information for motif26


Reverse Opposite:

p-value:1e-7
log p-value:-1.776e+01
Information Content per bp:1.724
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets118.8 +/- 63.5bp
Average Position of motif in Background90.7 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0030.1_Hnf4a_1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ACGGGGTCCATC--
CTCCAGGGGTCAATTGA

PB0025.1_Glis2_1/Jaspar

Match Rank:2
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----ACGGGGTCCATC
NTNTGGGGGGTCNNNA

PB0156.1_Plagl1_2/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACGGGGTCCATC--
GCTGGGGGGTACCCCTT

PB0057.1_Rxra_1/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ACGGGGTCCATC--
NTNNNGGGGTCANGNNN

PB0157.1_Rara_2/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ACGGGGTCCATC-
AGAGCGGGGTCAAGTA

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ACGGGGTCCATC-
CGCGCCGGGTCACGTA

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---ACGGGGTCCATC--
GGCGAGGGGTCAAGGGC

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--ACGGGGTCCATC--
NNNGGGGCGCCCCCNN

MA0059.1_MYC::MAX/Jaspar

Match Rank:9
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----ACGGGGTCCATC
GACCACGTGGT-----

MA0057.1_MZF1_5-13/Jaspar

Match Rank:10
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--ACGGGGTCCATC
GGAGGGGGAA----