Information for motif13


Reverse Opposite:

p-value:1e-11
log p-value:-2.673e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets104.8 +/- 49.1bp
Average Position of motif in Background160.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ATTGGCGGCC----
NNNNTTGGCGCCGANNN

MA0161.1_NFIC/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ATTGGCGGCC
-TTGGCA---

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ATTGGCGGCC
CCGATTGGCT---

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATTGGCGGCC----
NAGANTGGCGGGGNGNA

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATTGGCGGCC----
NNNNTTGGCGCCGANNN

PB0201.1_Zfp281_2/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATTGGCGGCC----
NNNATTGGGGGTNTCCT

YY1(Zf)/Promoter/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ATTGGCGGCC
CAAGATGGCGGC-

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ATTGGCGGCC-
---GGCGCGCT

MA0502.1_NFYB/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ATTGGCGGCC--
CTGATTGGTCNATTT

PH0109.1_Nkx1-1/Jaspar

Match Rank:10
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------ATTGGCGGCC
TGCGCTAATTAGTGGGA