Information for motif15


Reverse Opposite:

p-value:1e-9
log p-value:-2.158e+01
Information Content per bp:1.917
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets112.4 +/- 53.2bp
Average Position of motif in Background100.0 +/- 41.9bp
Strand Bias (log2 ratio + to - strand density)4.1
Multiplicity (# of sites on avg that occur together)3.60
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----CACTGGCRSTAC
CAATCACTGGCAGAAT

MA0161.1_NFIC/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CACTGGCRSTAC
--TTGGCA----

MA0100.2_Myb/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CACTGGCRSTAC
CCAACTGCCA----

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CACTGGCRSTAC
-CTTGGCAA---

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CACTGGCRSTAC
CCGATTGGCT----

PB0149.1_Myb_2/Jaspar

Match Rank:6
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----CACTGGCRSTAC
CGACCAACTGCCATGC-

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CACTGGCRSTAC
TGATTGGCTANN-

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CACTGGCRSTAC--
GVACAGNMTGTYCTB

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:9
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----CACTGGCRSTAC
ATTGCCTCAGGCAAT--

MA0464.1_Bhlhe40/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CACTGGCRSTAC
CTCACGTGCAC---