Information for motif21


Reverse Opposite:

p-value:1e-6
log p-value:-1.575e+01
Information Content per bp:1.920
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif16.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets76.0 +/- 41.9bp
Average Position of motif in Background93.9 +/- 54.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0105.1_Meis3/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TTCACAGGTAAT-
GTATTGACAGGTNNTT

PH0104.1_Meis2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTCACAGGTAAT-
NTATTGACAGGTNNTN

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TTCACAGGTAAT
--NACAGGAAAT

PH0102.1_Meis1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTCACAGGTAAT-
NTATTGACAGCTNNTT

PH0170.1_Tgif2/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTCACAGGTAAT-
GTATTGACAGCTNNTT

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TTCACAGGTAAT
--NACAGGAAAT

PH0140.1_Pknox1/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTCACAGGTAAT-
GGATTGACAGGTCNTT

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTCACAGGTAAT
--CACAGN----

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TTCACAGGTAAT
--AACAGGAAGT

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTCACAGGTAAT-
NNATTGACAGGTGCTT