Information for motif27


Reverse Opposite:

p-value:1e-5
log p-value:-1.164e+01
Information Content per bp:1.847
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif28.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets108.1 +/- 51.1bp
Average Position of motif in Background110.7 +/- 65.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTGGTTACA--
NNANTGGTGGTCTTNNN

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGGTGGTTACA
NNTGTGGTTT--

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GTGGTGGTTACA
NNHTGTGGTTWN----

MA0130.1_ZNF354C/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTGGTGGTTACA
GTGGAT------

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTGGTGGTTACA
GCTGTGGTTT--

PB0201.1_Zfp281_2/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GTGGTGGTTACA-
NNNATTGGGGGTNTCCT

MA0027.1_En1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTGGTGGTTACA
AAGTAGTGCCC---

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTGGTGGTTACA
-CTGTGGTTTN-

MA0511.1_RUNX2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GTGGTGGTTACA
GGGGTTTGTGGTTTG-

MA0002.2_RUNX1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GTGGTGGTTACA
GTCTGTGGTTT--