Information for motif29


Reverse Opposite:

p-value:1e-2
log p-value:-6.171e+00
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif15.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets110.6 +/- 58.4bp
Average Position of motif in Background84.3 +/- 56.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)4.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GGCACTTCCA--
--CACTTCCTCT

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GGCACTTCCA--
--CACTTCCTGT

MA0062.2_GABPA/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGCACTTCCA-
NCCACTTCCGG

MA0473.1_ELF1/Jaspar

Match Rank:4
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GGCACTTCCA-----
--CACTTCCTGNTTC

MA0101.1_REL/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGCACTTCCA
GGGGATTTCC-

PB0058.1_Sfpi1_1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGCACTTCCA-----
-NNACTTCCTCTTNN

MA0080.3_Spi1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGCACTTCCA------
-NCACTTCCTCTTTTN

MA0076.2_ELK4/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGCACTTCCA--
-CCACTTCCGGC

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGCACTTCCA
NGGGGATTTCCC

MA0107.1_RELA/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGCACTTCCA
GGGAATTTCC-