Information for motif7


Reverse Opposite:

p-value:1e-17
log p-value:-3.978e+01
Information Content per bp:1.653
Number of Target Sequences with motif211.0
Percentage of Target Sequences with motif12.58%
Number of Background Sequences with motif3224.3
Percentage of Background Sequences with motif6.74%
Average Position of motif in Targets102.0 +/- 56.9bp
Average Position of motif in Background98.6 +/- 57.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E-box(HLH)/Promoter/Homer

Match Rank:1
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:ATCACGTGAC---
-TCACGTGACCGG

Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:2
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:ATCACGTGAC
ACCACGTGAC

MA0093.2_USF1/Jaspar

Match Rank:3
Score:0.87
Offset:0
Orientation:forward strand
Alignment:ATCACGTGAC-
GCCACGTGACC

USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:ATCACGTGAC-
-TCACGTGACC

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:5
Score:0.85
Offset:-6
Orientation:forward strand
Alignment:------ATCACGTGAC------
GGAAGAGTCACGTGACCAATAC

MA0526.1_USF2/Jaspar

Match Rank:6
Score:0.84
Offset:0
Orientation:forward strand
Alignment:ATCACGTGAC-
GTCATGTGACC

CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:ATCACGTGAC
--CACGTGDC

bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.81
Offset:1
Orientation:forward strand
Alignment:ATCACGTGAC-
-KCACGTGMCN

BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:ATCACGTGAC
--CACGTGNC

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:10
Score:0.81
Offset:0
Orientation:forward strand
Alignment:ATCACGTGAC
ACCACGTG--