Information for motif9


Reverse Opposite:

p-value:1e-16
log p-value:-3.720e+01
Information Content per bp:1.837
Number of Target Sequences with motif316.0
Percentage of Target Sequences with motif18.84%
Number of Background Sequences with motif5660.1
Percentage of Background Sequences with motif11.82%
Average Position of motif in Targets101.0 +/- 55.8bp
Average Position of motif in Background99.8 +/- 60.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0079.3_SP1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GCGCCTCC---
GCCCCGCCCCC

MA0599.1_KLF5/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GCGCCTCC--
GCCCCGCCCC

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GCGCCTCC----
NAGCCCCGCCCCCN

MA0039.2_Klf4/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCGCCTCC--
GCCCCACCCA

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCGCCTCC---
GGCCCCGCCCCC

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCGCCTCC-
CNGTCCTCCC

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCGCCTCC--
GCCMCRCCCH

MA0516.1_SP2/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCGCCTCC-------
GCCCCGCCCCCTCCC

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GCGCCTCC-----
GGTCCCGCCCCCTTCTC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCGCCTCC-
-CCCCCCCC