Information for motif13


Reverse Opposite:

p-value:1e-38
log p-value:-8.811e+01
Information Content per bp:1.661
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets97.6 +/- 57.6bp
Average Position of motif in Background105.8 +/- 41.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CGAGCGCAAG--
GGGCCGTGTGCAAAAA

MA0506.1_NRF1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGAGCGCAAG---
--TGCGCAGGCGC

MA0024.2_E2F1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGAGCGCAAG-
CGGGCGGGAGG

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGAGCGCAAG
-CAGCC----

NRF1/Promoter/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CGAGCGCAAG-----
---GCGCATGCGCAC

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGAGCGCAAG-
GAAAGTGAAAGT

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CGAGCGCAAG-----
---GCGCATGCGCAG

MF0001.1_ETS_class/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CGAGCGCAAG
--ACCGGAAG

MA0505.1_Nr5a2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGAGCGCAAG------
-AAGTTCAAGGTCAGC

ETS(ETS)/Promoter/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CGAGCGCAAG-
-AACCGGAAGT