Information for motif16


Reverse Opposite:

p-value:1e-27
log p-value:-6.399e+01
Information Content per bp:1.838
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets111.3 +/- 54.9bp
Average Position of motif in Background31.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0197.1_Zfp105_2/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GTATTGAGCC--
NAAANTTATTGAANCAN

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTATTGAGCC
NTATYGATCH

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GTATTGAGCC
-----CAGCC

PB0106.1_Arid5a_2/Jaspar

Match Rank:4
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------GTATTGAGCC
TNNTTTCGTATTNNANN

PB0030.1_Hnf4a_1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTATTGAGCC------
NNANTTGACCCCTNNNN

PH0151.1_Pou6f1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTATTGAGCC---
GACGATAATGAGCTTGC

PH0152.1_Pou6f1_2/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GTATTGAGCC---
AAACATAATGAGGTTGC

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GTATTGAGCC------
TGTCGTGACCCCTTAAT

PH0049.1_Hoxa2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GTATTGAGCC---
AAGGTAATTAGCTCAT

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GTATTGAGCC------
NNCNTGACCCCGCTCT