Information for motif17


Reverse Opposite:

p-value:1e-26
log p-value:-6.109e+01
Information Content per bp:1.738
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets103.4 +/- 50.5bp
Average Position of motif in Background118.1 +/- 53.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CTCCCCTGCTGT-
-CCCCCTGCTGTG

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CTCCCCTGCTGT----
-TCNCCTGCTGNGNNN

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CTCCCCTGCTGT----
-TNTCCTGCTGTGNNG

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CTCCCCTGCTGT----
-NNTCCTGCTGTGNNN

MA0500.1_Myog/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTCCCCTGCTGT-
--NNGCAGCTGTC

MA0521.1_Tcf12/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTCCCCTGCTGT-
--NNGCAGCTGTT

MA0056.1_MZF1_1-4/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTCCCCTGCTGT
-TCCCCA-----

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:8
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CTCCCCTGCTGT-
-----CAGCTGTT

MA0499.1_Myod1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTCCCCTGCTGT----
---TGCAGCTGTCCCT

MA0522.1_Tcf3/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTCCCCTGCTGT--
---CACAGCTGCAG