Information for motif22


Reverse Opposite:

p-value:1e-24
log p-value:-5.552e+01
Information Content per bp:1.696
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets98.8 +/- 56.5bp
Average Position of motif in Background109.9 +/- 36.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0052.2_MEF2A/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CAGGCTCTTTTT----
-NNGCTATTTTTAGCN

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CAGGCTCTTTTT---
---KCTATTTTTRGH

MA0497.1_MEF2C/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAGGCTCTTTTT-----
--TTCTATTTTTAGNNN

PB0146.1_Mafk_2/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCTCTTTTT--
CCTTGCAATTTTTNN

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAGGCTCTTTTT
--NGCTN-----

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CAGGCTCTTTTT--
----CTATTTTTGG

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CAGGCTCTTTTT
ANCAGGATGT----

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CAGGCTCTTTTT-------
-----TTTTTTTTCNNGTN

PH0152.1_Pou6f1_2/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCTCTTTTT----
GCAACCTCATTATNNNN

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CAGGCTCTTTTT--
TCAGTTTCATTTTCC