Information for motif23


Reverse Opposite:

p-value:1e-23
log p-value:-5.446e+01
Information Content per bp:1.763
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets85.7 +/- 46.1bp
Average Position of motif in Background97.6 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0467.1_Crx/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AAAGGAGATTAG
-AAGAGGATTAG

T1ISRE(IRF)/Ifnb-Exp/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AAAGGAGATTAG
AGAAACGAAAGT--

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AAAGGAGATTAG
-AAGGATATNTN

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAAGGAGATTAG
NACAGGAAAT---

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AAAGGAGATTAG
ANGNAAAGGTCA----

MA0136.1_ELF5/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AAAGGAGATTAG
-AAGGAAGTA--

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAAGGAGATTAG
TAATYNRATTAR

PH0094.1_Lhx4/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAAGGAGATTAG----
CAAAGCTAATTAGNTTN

PB0169.1_Sox15_2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAAGGAGATTAG-
TTGAATGAAATTCGA

PB0033.1_Irf3_1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAAGGAGATTAG
GAGAACCGAAACTG-