Information for motif25


Reverse Opposite:

p-value:1e-21
log p-value:-4.837e+01
Information Content per bp:1.928
Number of Target Sequences with motif206.0
Percentage of Target Sequences with motif2.86%
Number of Background Sequences with motif82.1
Percentage of Background Sequences with motif1.37%
Average Position of motif in Targets104.3 +/- 54.5bp
Average Position of motif in Background91.6 +/- 56.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:1
Score:0.95
Offset:-4
Orientation:reverse strand
Alignment:----GATCAAAG-----
NNNAGATCAAAGGANNN

PB0040.1_Lef1_1/Jaspar

Match Rank:2
Score:0.94
Offset:-4
Orientation:reverse strand
Alignment:----GATCAAAG-----
NANAGATCAAAGGGNNN

PB0082.1_Tcf3_1/Jaspar

Match Rank:3
Score:0.92
Offset:-4
Orientation:forward strand
Alignment:----GATCAAAG-----
TATAGATCAAAGGAAAA

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-GATCAAAG---
ACATCAAAGGNA

MA0523.1_TCF7L2/Jaspar

Match Rank:5
Score:0.91
Offset:-3
Orientation:forward strand
Alignment:---GATCAAAG---
AAAGATCAAAGGAA

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.90
Offset:-4
Orientation:forward strand
Alignment:----GATCAAAG-----
TATAGATCAAAGGAAAA

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-GATCAAAG-
ACATCAAAGG

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-GATCAAAG-
ACWTCAAAGG

MA0151.1_ARID3A/Jaspar

Match Rank:9
Score:0.80
Offset:1
Orientation:forward strand
Alignment:GATCAAAG
-ATTAAA-

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GATCAAAG-----
AGAAGAACAAAGGACTA