Information for motif26


Reverse Opposite:

p-value:1e-20
log p-value:-4.824e+01
Information Content per bp:1.953
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets112.1 +/- 58.8bp
Average Position of motif in Background99.8 +/- 85.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0162.1_Six2/Jaspar

Match Rank:1
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------GATACCGC---
ANANGTGATACCCCATT

PH0161.1_Six1/Jaspar

Match Rank:2
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------GATACCGC---
ANNNATGATACCCCATC

PB0059.1_Six6_1/Jaspar

Match Rank:3
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------GATACCGC---
ANANNTGATACCCNATN

PB0127.1_Gata6_2/Jaspar

Match Rank:4
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GATACCGC----
GCGGCGATATCGCAGCG

PH0166.1_Six6_2/Jaspar

Match Rank:5
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------GATACCGC---
AATNTTGATACCCTATN

PH0165.1_Six6_1/Jaspar

Match Rank:6
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------GATACCGC---
ANANNTGATACCCTATN

PH0163.1_Six3/Jaspar

Match Rank:7
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------GATACCGC---
ANANGTGATACCCTATN

PH0164.1_Six4/Jaspar

Match Rank:8
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------GATACCGC---
ATAAATGACACCTATCA

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GATACCGC
ACTGAAACCA-

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:10
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------GATACCGC--
CTACTTGGATACGGAAT