Information for motif28


Reverse Opposite:

p-value:1e-19
log p-value:-4.398e+01
Information Content per bp:1.681
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets82.2 +/- 54.6bp
Average Position of motif in Background58.9 +/- 54.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TCTCGCGCAA
NNAATTCTCGNTNAN

MA0527.1_ZBTB33/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCTCGCGCAA----
CTCTCGCGAGATCTG

GFX(?)/Promoter/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCTCGCGCAA
ATTCTCGCGAGA

CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCTCGCGCAA-
-GTTGCGCAAT

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCTCGCGCAA---
GTTCTCGCGAGANCC

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TCTCGCGCAA
ACCACTCTCGGTCAC

E2F(E2F)/Cell-Cycle-Exp/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCTCGCGCAA-
TTTTCGCGCGAA

MA0102.3_CEBPA/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCTCGCGCAA-
NATTGTGCAAT

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TCTCGCGCAA
AGTATTCTCGGTTGC

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCTCGCGCAA-
--TTATGCAAT