Information for motif31


Reverse Opposite:

p-value:1e-17
log p-value:-4.085e+01
Information Content per bp:1.530
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets101.7 +/- 61.5bp
Average Position of motif in Background18.8 +/- 9.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0062.2_GABPA/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGAAAGCGGC
CCGGAAGTGGC

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CGAAAGCGGC
ACTGAAACCA--

MA0076.2_ELK4/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGAAAGCGGC
NCCGGAAGTGG-

PB0034.1_Irf4_1/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CGAAAGCGGC
CGTATCGAAACCAAA

PB0035.1_Irf5_1/Jaspar

Match Rank:5
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CGAAAGCGGC
ATAAACCGAAACCAA-

PB0127.1_Gata6_2/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CGAAAGCGGC--
NGCTGCGATATCGNCGC

PB0036.1_Irf6_1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CGAAAGCGGC--
CTGATCGAAACCAAAGT

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CGAAAGCGGC
ANCCGGAAGT---

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CGAAAGCGGC
RCCGGAAGTD--

PB0137.1_Irf3_2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CGAAAGCGGC--
GGAGAAAGGTGCGA