Information for motif32


Reverse Opposite:

p-value:1e-17
log p-value:-3.976e+01
Information Content per bp:1.951
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets104.7 +/- 52.4bp
Average Position of motif in Background118.5 +/- 5.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTAAGGCG-------
CAAAGGCGTGGCCAG

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CTAAGGCG
ATGCCCTGAGGC-

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CTAAGGCG
WTGSCCTSAGGS-

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CTAAGGCG--
ATTGCCTGAGGCAAT

PB0008.1_E2F2_1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTAAGGCG------
ATAAAGGCGCGCGAT

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTAAGGCG------
ATAAGGGCGCGCGAT

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTAAGGCG
CTAATKGV

MA0109.1_Hltf/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTAAGGCG
NNATAAGGNN

MA0132.1_Pdx1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTAAGGCG
CTAATT--

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CTAAGGCG----
----GGCGCGCT