Information for motif33


Reverse Opposite:

p-value:1e-15
log p-value:-3.676e+01
Information Content per bp:1.530
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif18.1
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets89.3 +/- 57.0bp
Average Position of motif in Background105.4 +/- 73.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0164.1_Nr2e3/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AGCTTAGC
CAAGCTT---

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGCTTAGC
GGATTAGC

MA0467.1_Crx/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AGCTTAGC
AAGAGGATTAG-

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGCTTAGC--
NNCTTATCTN

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGCTTAGC---
-YCTTATCWVN

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGCTTAGC--
NCCTTATCTG

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCTTAGC
CAGCC----

PB0023.1_Gata6_1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGCTTAGC------
NNANTCTTATCTNNNNN

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCTTAGC------
TACCATAGCAACGGT

MA0482.1_Gata4/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGCTTAGC----
-TCTTATCTCCC