Information for motif13


Reverse Opposite:

p-value:1e-16
log p-value:-3.701e+01
Information Content per bp:1.455
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif77.0
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets109.0 +/- 51.8bp
Average Position of motif in Background83.0 +/- 60.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CGTRTTGACA--
GGTGYTGACAGS

MA0133.1_BRCA1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CGTRTTGACA
-GTGTTGN--

PH0105.1_Meis3/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CGTRTTGACA-------
-GTATTGACAGGTNNTT

PH0102.1_Meis1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGTRTTGACA-------
-NTATTGACAGCTNNTT

PH0170.1_Tgif2/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGTRTTGACA-------
-GTATTGACAGCTNNTT

PH0104.1_Meis2/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGTRTTGACA-------
-NTATTGACAGGTNNTN

PH0140.1_Pknox1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGTRTTGACA-------
-GGATTGACAGGTCNTT

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGTRTTGACA-------
-NNATTGACAGGTGCTT

PB0117.1_Eomes_2/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CGTRTTGACA-
GCGGAGGTGTCGCCTC

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGTRTTGACA-------
GATATTGACAGCTGCGT