Information for motif17


Reverse Opposite:

p-value:1e-12
log p-value:-2.970e+01
Information Content per bp:1.776
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets142.6 +/- 30.2bp
Average Position of motif in Background69.9 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0117.1_Mafb/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGGCTGATTCGA
--GCTGACGC--

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGGCTGATTCGA
-NGCTN------

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGGCTGATTCGA
-TGCTGACTCA-

MA0597.1_THAP1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGGCTGATTCGA
TNNGGGCAG------

MA0596.1_SREBF2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGGCTGATTCGA
ATGGGGTGAT----

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGGCTGATTCGA
-TGCTGAGTCA-

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGGCTGATTCGA
AGGGGGCGGGGCTG-

MA0595.1_SREBF1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGGCTGATTCGA
GTGGGGTGAT----

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGGCTGATTCGA
TWGTCTGV-----

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGGCTGATTCGA
ATGGGGTGAT----