Information for motif2


Reverse Opposite:

p-value:1e-183
log p-value:-4.219e+02
Information Content per bp:1.540
Number of Target Sequences with motif609.0
Percentage of Target Sequences with motif8.47%
Number of Background Sequences with motif868.6
Percentage of Background Sequences with motif2.05%
Average Position of motif in Targets98.9 +/- 48.2bp
Average Position of motif in Background99.1 +/- 60.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.91
Offset:-7
Orientation:forward strand
Alignment:-------GCCCCCTGGTGG-
CNNBRGCGCCCCCTGSTGGC

MA0139.1_CTCF/Jaspar

Match Rank:2
Score:0.89
Offset:-4
Orientation:reverse strand
Alignment:----GCCCCCTGGTGG---
TAGCGCCCCCTGGTGGCCA

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:3
Score:0.86
Offset:-5
Orientation:forward strand
Alignment:-----GCCCCCTGGTGG---
ANAGTGCCACCTGGTGGCCA

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GCCCCCTGGTGG-
-CCCCCTGCTGTG

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GCCCCCTGGTGG--
CCCCCCCGGGGGNN

PB0102.1_Zic2_1/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GCCCCCTGGTGG--
ACCCCCCCGGGGGGN

PB0103.1_Zic3_1/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GCCCCCTGGTGG--
NCCCCCCCGGGGGGN

MA0154.2_EBF1/Jaspar

Match Rank:8
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GCCCCCTGGTGG-
--TCCCTGGGGAN

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCCCCCTGGTGG
GTCCCCAGGGGA

MA0116.1_Zfp423/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCCCCCTGGTGG---
GGCACCCAGGGGTGC