Information for motif20


Reverse Opposite:

p-value:1e-10
log p-value:-2.481e+01
Information Content per bp:1.950
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif31.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets120.7 +/- 45.5bp
Average Position of motif in Background107.6 +/- 42.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AGCCGCCACT---
TACGCCCCGCCACTCTG

PB0110.1_Bcl6b_2/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AGCCGCCACT----
ATCCCCGCCCCTAAAA

PB0202.1_Zfp410_2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGCCGCCACT----
TCACCCCGCCCCAAATT

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AGCCGCCACT---
AGCTCGGCGCCAAAAGC

MA0122.1_Nkx3-2/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AGCCGCCACT---
----NCCACTTAN

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGCCGCCACT---
-GCCGCCATCTTG

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGCCGCCACT---
CCTTCGGCGCCAAAAGG

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AGCCGCCACT
AGCAACAGCCGCACC-

MA0516.1_SP2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGCCGCCACT----
GCCCCGCCCCCTCCC

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGCCGCCACT
YAACBGCC---