Information for motif22


Reverse Opposite:

p-value:1e-8
log p-value:-2.009e+01
Information Content per bp:1.876
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets95.4 +/- 55.1bp
Average Position of motif in Background56.5 +/- 0.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0014.1_Cphx/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TTGACTATATCA-
NTTGATTNNATCAN

PB0125.1_Gata3_2/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TTGACTATATCA-----
TTTTGTAGATTTTATCGACTTA

GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTGACTATATCA------
NDBAGATRWTATCTVNNNNN

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTGACTATATCA
NNATTGGACTTTNGNN

PH0026.1_Duxbl/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TTGACTATATCA------
-CGACCCAATCAACGGTG

PH0037.1_Hdx/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TTGACTATATCA-----
AAGGCGAAATCATCGCA

MA0468.1_DUX4/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TTGACTATATCA
-TAATTTAATCA

PH0040.1_Hmbox1/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TTGACTATATCA-
GANGTTAACTAGTTTNN

PB0163.1_Six6_2/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TTGACTATATCA---
ANNNGGATATATCCNNN

PB0105.1_Arid3a_2/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TTGACTATATCA-----
--ACCCGTATCAAATTT