Information for motif26


Reverse Opposite:

p-value:1e-6
log p-value:-1.465e+01
Information Content per bp:1.957
Number of Target Sequences with motif147.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif561.9
Percentage of Background Sequences with motif1.33%
Average Position of motif in Targets90.0 +/- 56.4bp
Average Position of motif in Background101.1 +/- 59.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGCTCTTT
NGCTN---

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGCTCTTT-----
-KCTATTTTTRGH

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGCTCTTT-
AASCACTCAA

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GGCTCTTT----
--CTATTTTTGG

MA0052.2_MEF2A/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGCTCTTT------
NNGCTATTTTTAGCN

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GGCTCTTT----
TACGAGACTCCTCTAAC

MA0497.1_MEF2C/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGCTCTTT-------
TTCTATTTTTAGNNN

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGCTCTTT--
RSCACTYRAG

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGCTCTTT
GGCGCGCT

MA0042.1_FOXI1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGCTCTTT----
GGATGTTTGTTT