Information for motif27


Reverse Opposite:

p-value:1e-6
log p-value:-1.446e+01
Information Content per bp:1.592
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets109.7 +/- 54.7bp
Average Position of motif in Background104.9 +/- 72.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTAGCAGGCGGT
CACAGCAGGGGG-

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTAGCAGGCGGT
--NNCAGGTGNN

MA0059.1_MYC::MAX/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTAGCAGGCGGT
-GACCACGTGGT

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TTAGCAGGCGGT
--ANCAGGATGT

PB0003.1_Ascl2_1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTAGCAGGCGGT---
NNNNAGCAGCTGCTGAN

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TTAGCAGGCGGT
CCACACAGCAGGAGA-

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:7
Score:0.55
Offset:6
Orientation:forward strand
Alignment:TTAGCAGGCGGT--
------GGCVGTTR

MA0461.1_Atoh1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TTAGCAGGCGGT
----CAGATGGC

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TTAGCAGGCGGT-
---ACAGGAAGTG

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TTAGCAGGCGGT
CCACACAGCAGGAGA-