Information for motif29


Reverse Opposite:

p-value:1e-4
log p-value:-1.021e+01
Information Content per bp:1.641
Number of Target Sequences with motif149.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif623.1
Percentage of Background Sequences with motif1.47%
Average Position of motif in Targets102.5 +/- 58.6bp
Average Position of motif in Background99.5 +/- 57.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT6/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CTTCCATAGAKA
-TTCCKNAGAA-

MA0520.1_Stat6/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CTTCCATAGAKA-
CATTTCCTGAGAAAT

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTTCCATAGAKA-
-TTCTNNAGAANT

MA0136.1_ELF5/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTTCCATAGAKA
TACTTCCTT-----

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTTCCATAGAKA
GCTTCC-------

MA0152.1_NFATC2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTTCCATAGAKA
TTTTCCA------

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTTCCATAGAKA
ATTTTCCATT----

PB0078.1_Srf_1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTTCCATAGAKA---
-TNCCATATATGGNA

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTTCCATAGAKA-
---CCATATATGG

MA0144.2_STAT3/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTTCCATAGAKA
TTTCCCAGAAN-