Information for motif3


Reverse Opposite:

p-value:1e-108
log p-value:-2.498e+02
Information Content per bp:1.624
Number of Target Sequences with motif1803.0
Percentage of Target Sequences with motif25.07%
Number of Background Sequences with motif6361.0
Percentage of Background Sequences with motif15.01%
Average Position of motif in Targets99.6 +/- 54.2bp
Average Position of motif in Background100.1 +/- 60.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.94
Offset:0
Orientation:forward strand
Alignment:DTTMACACCT
ATTAACACCT

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:2
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:DTTMACACCT
KTTCACACCT

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.91
Offset:2
Orientation:reverse strand
Alignment:DTTMACACCT
--TGACACCT

PB0013.1_Eomes_1/Jaspar

Match Rank:4
Score:0.87
Offset:-3
Orientation:reverse strand
Alignment:---DTTMACACCT----
NNTTTTCACACCTTNNN

MA0009.1_T/Jaspar

Match Rank:5
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:DTTMACACCT--
-TTCACACCTAG

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-DTTMACACCT------
NNTNCGCACCTGTNGAN

PH0164.1_Six4/Jaspar

Match Rank:7
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---DTTMACACCT----
ATAAATGACACCTATCA

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.70
Offset:3
Orientation:forward strand
Alignment:DTTMACACCT---
---NNCACCTGNN

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--DTTMACACCT----
GTATTGACAGCTNNTT

MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar

Match Rank:10
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---DTTMACACCT
CTGTCTGTCACCT