Information for motif8


Reverse Opposite:

p-value:1e-40
log p-value:-9.364e+01
Information Content per bp:1.728
Number of Target Sequences with motif492.0
Percentage of Target Sequences with motif6.84%
Number of Background Sequences with motif1503.4
Percentage of Background Sequences with motif3.55%
Average Position of motif in Targets100.1 +/- 53.1bp
Average Position of motif in Background97.2 +/- 58.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0079.3_SP1/Jaspar

Match Rank:1
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:GKGGGAGGGGCY
GGGGGCGGGGC-

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-GKGGGAGGGGCY-
AGGGGGCGGGGCTG

MA0599.1_KLF5/Jaspar

Match Rank:3
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:GKGGGAGGGGCY
-GGGGNGGGGC-

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:GKGGGAGGGGCY
GGGGGCGGGGCC

MA0516.1_SP2/Jaspar

Match Rank:5
Score:0.83
Offset:-4
Orientation:reverse strand
Alignment:----GKGGGAGGGGCY
GGGNGGGGGCGGGGC-

MA0039.2_Klf4/Jaspar

Match Rank:6
Score:0.80
Offset:1
Orientation:forward strand
Alignment:GKGGGAGGGGCY
-TGGGTGGGGC-

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.80
Offset:1
Orientation:forward strand
Alignment:GKGGGAGGGGCY
-DGGGYGKGGC-

MA0162.2_EGR1/Jaspar

Match Rank:8
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---GKGGGAGGGGCY
GGCGGGGGCGGGGG-

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.75
Offset:2
Orientation:forward strand
Alignment:GKGGGAGGGGCY
--GGGGGGGG--

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GKGGGAGGGGCY--
NNAGGGGCGGGGTNNA