Information for motif9


Reverse Opposite:

p-value:1e-35
log p-value:-8.203e+01
Information Content per bp:1.807
Number of Target Sequences with motif1443.0
Percentage of Target Sequences with motif20.06%
Number of Background Sequences with motif6185.4
Percentage of Background Sequences with motif14.60%
Average Position of motif in Targets100.8 +/- 55.8bp
Average Position of motif in Background100.8 +/- 61.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0461.1_Atoh1/Jaspar

Match Rank:1
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:GCCAGCTG
GCCATCTG

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:2
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:GCCAGCTG---
-HCAGCTGDTN

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.87
Offset:1
Orientation:forward strand
Alignment:GCCAGCTG---
-NCAGCTGCTG

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:4
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:GCCAGCTG----
GCCAGCTGBTNB

MA0500.1_Myog/Jaspar

Match Rank:5
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGCTG--
NNGCAGCTGTC

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-GCCAGCTG-
NNACAGCTGC

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:GCCAGCTG--
--CAGCTGTT

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.86
Offset:1
Orientation:forward strand
Alignment:GCCAGCTG---
-ACAGCTGTTN

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:GCCAGCTG--
--CAGCTGNT

MA0521.1_Tcf12/Jaspar

Match Rank:10
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGCTG--
NNGCAGCTGTT