Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 7193)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 42366)	% of Background Sequences with Motif
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e-286	-6.588e+02	0.0000	1671.0	23.23%	3783.3	8.93%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e-270	-6.236e+02	0.0000	1415.0	19.67%	2955.1	6.97%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e-253	-5.836e+02	0.0000	1320.0	18.35%	2738.8	6.46%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-220	-5.067e+02	0.0000	465.0	6.47%	406.8	0.96%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-187	-4.313e+02	0.0000	528.0	7.34%	641.4	1.51%
Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e-162	-3.739e+02	0.0000	1424.0	19.80%	3924.4	9.26%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e-116	-2.693e+02	0.0000	656.0	9.12%	1384.8	3.27%
Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e-107	-2.486e+02	0.0000	978.0	13.60%	2687.9	6.34%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e-91	-2.108e+02	0.0000	2136.0	29.70%	8323.9	19.64%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e-74	-1.725e+02	0.0000	1060.0	14.74%	3471.5	8.19%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer	CTGTTTAC	1e-68	-1.582e+02	0.0000	1892.0	26.31%	7599.0	17.93%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e-66	-1.522e+02	0.0000	1452.0	20.19%	5468.0	12.90%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-59	-1.369e+02	0.0000	3076.0	42.77%	14197.2	33.51%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e-54	-1.256e+02	0.0000	991.0	13.78%	3502.3	8.27%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e-51	-1.178e+02	0.0000	2022.0	28.11%	8735.7	20.62%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e-48	-1.126e+02	0.0000	705.0	9.80%	2302.5	5.43%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e-48	-1.120e+02	0.0000	1088.0	15.13%	4078.2	9.62%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e-47	-1.103e+02	0.0000	1316.0	18.30%	5207.1	12.29%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e-46	-1.060e+02	0.0000	642.0	8.93%	2070.7	4.89%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e-37	-8.706e+01	0.0000	1996.0	27.75%	9025.2	21.30%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e-37	-8.597e+01	0.0000	1544.0	21.47%	6656.0	15.71%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e-36	-8.422e+01	0.0000	841.0	11.69%	3158.3	7.45%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e-35	-8.174e+01	0.0000	1687.0	23.46%	7462.9	17.61%
Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e-34	-8.007e+01	0.0000	384.0	5.34%	1131.7	2.67%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e-34	-7.925e+01	0.0000	3260.0	45.33%	16185.7	38.20%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e-33	-7.711e+01	0.0000	1339.0	18.62%	5715.5	13.49%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e-26	-6.100e+01	0.0000	291.0	4.05%	856.8	2.02%
Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e-25	-5.808e+01	0.0000	2429.0	33.77%	11913.3	28.12%
E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e-24	-5.615e+01	0.0000	1475.0	20.51%	6741.3	15.91%
SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-21	-4.927e+01	0.0000	3874.0	53.87%	20424.9	48.20%
Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e-17	-4.064e+01	0.0000	219.0	3.05%	678.3	1.60%
Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-16	-3.892e+01	0.0000	1189.0	16.53%	5528.7	13.05%
Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e-16	-3.843e+01	0.0000	1010.0	14.04%	4590.5	10.83%
E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e-16	-3.816e+01	0.0000	1351.0	18.78%	6411.6	15.13%
OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e-16	-3.786e+01	0.0000	139.0	1.93%	368.1	0.87%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e-15	-3.496e+01	0.0000	1154.0	16.05%	5418.2	12.79%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e-14	-3.404e+01	0.0000	392.0	5.45%	1521.1	3.59%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e-14	-3.290e+01	0.0000	3094.0	43.02%	16333.0	38.55%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e-12	-2.976e+01	0.0000	362.0	5.03%	1424.5	3.36%
Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e-12	-2.777e+01	0.0000	213.0	2.96%	745.6	1.76%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e-11	-2.566e+01	0.0000	969.0	13.47%	4621.9	10.91%
MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e-10	-2.524e+01	0.0000	1031.0	14.34%	4964.2	11.72%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e-10	-2.419e+01	0.0000	234.0	3.25%	874.1	2.06%
Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e-9	-2.263e+01	0.0000	118.0	1.64%	366.7	0.87%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e-8	-1.990e+01	0.0000	98.0	1.36%	299.8	0.71%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e-8	-1.960e+01	0.0000	621.0	8.63%	2896.2	6.84%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e-8	-1.897e+01	0.0000	744.0	10.34%	3564.3	8.41%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e-8	-1.891e+01	0.0000	465.0	6.47%	2093.9	4.94%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-8	-1.887e+01	0.0000	685.0	9.52%	3251.6	7.67%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e-8	-1.878e+01	0.0000	117.0	1.63%	388.3	0.92%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e-7	-1.838e+01	0.0000	106.0	1.47%	343.5	0.81%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e-7	-1.836e+01	0.0000	681.0	9.47%	3242.0	7.65%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-7	-1.713e+01	0.0000	1529.0	21.26%	7939.5	18.74%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e-7	-1.711e+01	0.0000	1211.0	16.84%	6165.0	14.55%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-7	-1.705e+01	0.0000	1338.0	18.60%	6873.3	16.22%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e-7	-1.676e+01	0.0000	206.0	2.86%	820.9	1.94%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-6	-1.606e+01	0.0000	448.0	6.23%	2058.0	4.86%
Pax7-long(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e-6	-1.598e+01	0.0000	31.0	0.43%	60.7	0.14%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-6	-1.593e+01	0.0000	1132.0	15.74%	5764.9	13.61%
FOXA1:AR/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e-6	-1.583e+01	0.0000	55.0	0.76%	147.6	0.35%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e-6	-1.573e+01	0.0000	424.0	5.90%	1938.9	4.58%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-6	-1.515e+01	0.0000	511.0	7.11%	2407.1	5.68%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-6	-1.494e+01	0.0000	840.0	11.68%	4186.7	9.88%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e-6	-1.482e+01	0.0000	962.0	13.38%	4859.8	11.47%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e-6	-1.439e+01	0.0000	209.0	2.91%	864.4	2.04%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e-6	-1.435e+01	0.0000	184.0	2.56%	742.4	1.75%
CTCF-SatelliteElement/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e-5	-1.256e+01	0.0000	27.0	0.38%	57.9	0.14%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-5	-1.208e+01	0.0000	170.0	2.36%	702.5	1.66%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e-5	-1.175e+01	0.0000	204.0	2.84%	876.4	2.07%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e-4	-1.104e+01	0.0001	325.0	4.52%	1512.9	3.57%
Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e-4	-1.100e+01	0.0001	197.0	2.74%	852.4	2.01%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-4	-1.087e+01	0.0001	428.0	5.95%	2062.4	4.87%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e-4	-9.995e+00	0.0002	1548.0	21.52%	8332.2	19.66%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e-4	-9.708e+00	0.0002	544.0	7.56%	2720.6	6.42%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e-3	-9.181e+00	0.0003	194.0	2.70%	866.1	2.04%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-3	-8.774e+00	0.0005	710.0	9.87%	3664.0	8.65%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e-3	-8.486e+00	0.0007	76.0	1.06%	289.3	0.68%
bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e-3	-8.468e+00	0.0007	247.0	3.43%	1155.0	2.73%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e-3	-8.439e+00	0.0007	136.0	1.89%	583.0	1.38%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e-3	-8.291e+00	0.0008	259.0	3.60%	1222.4	2.88%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e-3	-8.162e+00	0.0009	19.0	0.26%	44.1	0.10%
MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e-3	-7.911e+00	0.0011	698.0	9.71%	3630.0	8.57%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-3	-7.195e+00	0.0022	834.0	11.60%	4419.6	10.43%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-3	-7.163e+00	0.0023	801.0	11.14%	4235.6	10.00%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-3	-7.152e+00	0.0023	183.0	2.54%	846.3	2.00%
GATA:SCL/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e-3	-7.103e+00	0.0024	95.0	1.32%	397.6	0.94%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-3	-7.102e+00	0.0024	550.0	7.65%	2837.4	6.70%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e-3	-7.089e+00	0.0024	551.0	7.66%	2843.0	6.71%
PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e-3	-7.046e+00	0.0024	130.0	1.81%	574.1	1.35%
NF1:FOXA1/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e-3	-6.940e+00	0.0026	46.0	0.64%	164.7	0.39%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e-2	-6.594e+00	0.0037	68.0	0.95%	271.9	0.64%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e-2	-6.442e+00	0.0043	122.0	1.70%	543.6	1.28%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e-2	-6.235e+00	0.0052	1134.0	15.77%	6165.7	14.55%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e-2	-6.215e+00	0.0052	286.0	3.98%	1417.2	3.34%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e-2	-5.913e+00	0.0070	214.0	2.98%	1037.5	2.45%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-2	-5.884e+00	0.0071	140.0	1.95%	646.0	1.52%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e-2	-5.856e+00	0.0073	357.0	4.96%	1815.3	4.28%
GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e-2	-5.498e+00	0.0103	101.0	1.40%	451.8	1.07%
Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e-2	-5.432e+00	0.0109	57.0	0.79%	231.9	0.55%
USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e-2	-5.408e+00	0.0110	261.0	3.63%	1304.2	3.08%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-2	-5.386e+00	0.0112	379.0	5.27%	1952.1	4.61%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e-2	-5.252e+00	0.0126	347.0	4.82%	1780.8	4.20%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e-2	-5.232e+00	0.0128	825.0	11.47%	4462.2	10.53%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e-2	-5.208e+00	0.0130	1710.0	23.78%	9538.4	22.51%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e-2	-4.985e+00	0.0160	192.0	2.67%	942.8	2.23%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e-2	-4.907e+00	0.0172	79.0	1.10%	348.7	0.82%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-2	-4.889e+00	0.0173	158.0	2.20%	762.5	1.80%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e-2	-4.876e+00	0.0174	73.0	1.02%	318.8	0.75%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e-2	-4.863e+00	0.0174	485.0	6.74%	2562.3	6.05%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e-2	-4.851e+00	0.0175	440.0	6.12%	2311.2	5.45%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-2	-4.746e+00	0.0193	521.0	7.24%	2769.4	6.54%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	MACAGGAAGT	1e-2	-4.733e+00	0.0193	250.0	3.48%	1264.3	2.98%
Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e-1	-4.586e+00	0.0222	146.0	2.03%	705.3	1.66%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e-1	-4.464e+00	0.0249	877.0	12.19%	4801.2	11.33%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e-1	-4.079e+00	0.0362	248.0	3.45%	1274.3	3.01%
Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e-1	-4.075e+00	0.0362	97.0	1.35%	456.9	1.08%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-1	-4.049e+00	0.0367	365.0	5.08%	1925.6	4.54%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e-1	-3.891e+00	0.0426	1027.0	14.28%	5697.7	13.45%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e-1	-3.871e+00	0.0431	121.0	1.68%	588.5	1.39%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e-1	-3.827e+00	0.0447	1138.0	15.82%	6340.5	14.96%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e-1	-3.747e+00	0.0480	71.0	0.99%	326.8	0.77%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-1	-3.705e+00	0.0496	957.0	13.31%	5308.4	12.53%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e-1	-3.678e+00	0.0505	149.0	2.07%	744.0	1.76%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer	CCATATATGGNM	1e-1	-3.677e+00	0.0505	188.0	2.61%	957.4	2.26%
GATA-DR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e-1	-3.672e+00	0.0505	49.0	0.68%	215.0	0.51%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e-1	-3.548e+00	0.0562	270.0	3.75%	1415.0	3.34%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e-1	-3.257e+00	0.0746	1371.0	19.06%	7732.8	18.25%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e-1	-3.255e+00	0.0746	603.0	8.38%	3311.6	7.82%
CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e-1	-3.228e+00	0.0756	302.0	4.20%	1607.7	3.79%
PAX5-shortForm(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e-1	-3.193e+00	0.0776	66.0	0.92%	310.5	0.73%
ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e-1	-3.095e+00	0.0850	73.0	1.02%	349.0	0.82%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e-1	-2.948e+00	0.0977	134.0	1.86%	683.7	1.61%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e-1	-2.945e+00	0.0977	1630.0	22.66%	9265.6	21.87%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-1	-2.912e+00	0.0998	38.0	0.53%	169.4	0.40%
ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER	AGTTTCASTTTC	1e-1	-2.827e+00	0.1079	36.0	0.50%	160.8	0.38%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e-1	-2.821e+00	0.1079	2260.0	31.42%	12953.8	30.57%
BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer	NHAACBGYYV	1e-1	-2.700e+00	0.1207	1046.0	14.54%	5900.6	13.93%
ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e-1	-2.566e+00	0.1370	1343.0	18.67%	7635.6	18.02%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-1	-2.560e+00	0.1370	368.0	5.12%	2013.8	4.75%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-1	-2.560e+00	0.1370	431.0	5.99%	2372.9	5.60%
Max(HLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e-1	-2.449e+00	0.1506	369.0	5.13%	2025.2	4.78%
GATA-DR8(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e-1	-2.359e+00	0.1638	42.0	0.58%	199.0	0.47%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e-1	-2.318e+00	0.1693	12.0	0.17%	46.5	0.11%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	GCTGTGGTTW	1e0	-2.203e+00	0.1887	515.0	7.16%	2877.7	6.79%
PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-2.190e+00	0.1899	319.0	4.44%	1755.9	4.14%
Reverb(NR/DR2)/BLRP(RAW)-Reverba-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-2.135e+00	0.1993	95.0	1.32%	493.5	1.16%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-2.093e+00	0.2065	2100.0	29.20%	12108.0	28.57%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-2.061e+00	0.2116	398.0	5.53%	2215.2	5.23%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-2.061e+00	0.2116	910.0	12.65%	5172.7	12.21%
n-Myc(HLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-2.038e+00	0.2137	370.0	5.14%	2056.6	4.85%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-2.028e+00	0.2144	307.0	4.27%	1696.7	4.00%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-1.936e+00	0.2335	373.0	5.19%	2080.6	4.91%
RBPJ:Ebox/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-1.899e+00	0.2407	243.0	3.38%	1338.7	3.16%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-1.869e+00	0.2464	794.0	11.04%	4518.1	10.66%
NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer	GGAAATTCCC	1e0	-1.851e+00	0.2493	39.0	0.54%	193.5	0.46%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	-1.806e+00	0.2591	349.0	4.85%	1951.7	4.61%
Pax7-longest(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-1.800e+00	0.2591	11.0	0.15%	46.1	0.11%
HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-1.748e+00	0.2710	321.0	4.46%	1794.4	4.23%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-1.740e+00	0.2715	1171.0	16.28%	6726.1	15.87%
c-Myc/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-1.738e+00	0.2715	266.0	3.70%	1479.2	3.49%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-1.730e+00	0.2715	322.0	4.48%	1801.8	4.25%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-1.723e+00	0.2715	229.0	3.18%	1268.4	2.99%
GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-1.689e+00	0.2786	42.0	0.58%	213.1	0.50%
NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer	GGGGGAATCCCC	1e0	-1.668e+00	0.2830	67.0	0.93%	352.6	0.83%
TRa(NR)/C17.2-TRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-1.548e+00	0.3170	300.0	4.17%	1687.1	3.98%
PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-1.504e+00	0.3295	721.0	10.03%	4132.4	9.75%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-1.485e+00	0.3336	247.0	3.43%	1386.9	3.27%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-1.480e+00	0.3336	216.0	3.00%	1208.2	2.85%
GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-1.477e+00	0.3336	73.0	1.02%	392.7	0.93%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-1.365e+00	0.3694	180.0	2.50%	1008.2	2.38%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-1.357e+00	0.3703	54.0	0.75%	289.5	0.68%
c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer	VCCACGTG	1e0	-1.337e+00	0.3757	204.0	2.84%	1148.9	2.71%
E-box(HLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-1.315e+00	0.3818	39.0	0.54%	206.1	0.49%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-1.271e+00	0.3965	219.0	3.05%	1239.8	2.93%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-1.267e+00	0.3965	176.0	2.45%	991.3	2.34%
ERE(NR/IR3)/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-1.226e+00	0.4100	174.0	2.42%	982.5	2.32%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-1.168e+00	0.4323	558.0	7.76%	3220.8	7.60%
FXR(NR/IR1)/Liver-FXR-ChIP-Seq(Chong et al.)/Homer	AGGTCANTGACCTB	1e0	-1.157e+00	0.4344	266.0	3.70%	1520.1	3.59%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-1.132e+00	0.4431	1598.0	22.22%	9317.0	21.99%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-1.115e+00	0.4483	269.0	3.74%	1541.6	3.64%
Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-1.084e+00	0.4595	223.0	3.10%	1276.1	3.01%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-1.014e+00	0.4903	119.0	1.65%	677.2	1.60%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-9.915e-01	0.4987	467.0	6.49%	2709.6	6.39%
BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-9.645e-01	0.5096	1064.0	14.79%	6213.3	14.66%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-9.139e-01	0.5303	47.0	0.65%	265.7	0.63%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-9.139e-01	0.5303	47.0	0.65%	265.7	0.63%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-8.791e-01	0.5461	87.0	1.21%	499.4	1.18%
GRE/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-8.623e-01	0.5524	136.0	1.89%	787.0	1.86%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-8.322e-01	0.5663	61.0	0.85%	350.6	0.83%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-8.044e-01	0.5792	341.0	4.74%	1993.2	4.70%
TR4(NR/DR1)/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-7.953e-01	0.5814	80.0	1.11%	463.4	1.09%
bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-7.731e-01	0.5914	134.0	1.86%	781.6	1.84%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-7.448e-01	0.6052	1182.0	16.43%	6950.4	16.40%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-7.347e-01	0.6082	424.0	5.90%	2490.2	5.88%
PAX5(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-7.275e-01	0.6095	233.0	3.24%	1367.8	3.23%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-7.194e-01	0.6113	1179.0	16.39%	6938.9	16.38%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-6.499e-01	0.6520	439.0	6.10%	2591.7	6.12%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-6.476e-01	0.6520	293.0	4.07%	1730.6	4.08%
HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-6.447e-01	0.6520	98.0	1.36%	579.7	1.37%
NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-6.320e-01	0.6538	628.0	8.73%	3709.3	8.75%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-6.260e-01	0.6544	39.0	0.54%	231.5	0.55%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	-6.217e-01	0.6544	26.0	0.36%	154.4	0.36%
GRE(NR/IR3)/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-5.861e-01	0.6743	77.0	1.07%	459.9	1.09%
NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-5.796e-01	0.6754	85.0	1.18%	507.4	1.20%
CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-5.727e-01	0.6768	319.0	4.44%	1894.9	4.47%
Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-5.511e-01	0.6882	90.0	1.25%	539.1	1.27%
RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-5.319e-01	0.6982	844.0	11.74%	5006.7	11.82%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer	CYAAAAATAG	1e0	-5.143e-01	0.7072	179.0	2.49%	1072.6	2.53%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-4.864e-01	0.7237	486.0	6.76%	2898.5	6.84%
E2F(E2F)/Cell-Cycle-Exp/Homer	TTSGCGCGAAAA	1e0	-4.737e-01	0.7295	18.0	0.25%	112.9	0.27%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-3.909e-01	0.7886	486.0	6.76%	2919.0	6.89%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-3.797e-01	0.7937	1484.0	20.63%	8838.2	20.86%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	ATTTTCCATT	1e0	-3.538e-01	0.8107	468.0	6.51%	2821.4	6.66%
EBNA1(EBV virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	-3.120e-01	0.8415	8.0	0.11%	56.4	0.13%
NRF1/Promoter/Homer	STGCGCATGCGC	1e0	-3.100e-01	0.8415	64.0	0.89%	406.0	0.96%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-2.976e-01	0.8457	226.0	3.14%	1387.5	3.27%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-2.845e-01	0.8529	145.0	2.02%	901.6	2.13%
CHR/Cell-Cycle-Exp/Homer	SRGTTTCAAA	1e0	-2.541e-01	0.8752	291.0	4.05%	1788.6	4.22%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer	GYCATCMATCAT	1e0	-2.450e-01	0.8792	45.0	0.63%	295.5	0.70%
ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-2.357e-01	0.8834	49.0	0.68%	321.3	0.76%
HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-2.307e-01	0.8838	144.0	2.00%	905.5	2.14%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	-2.027e-01	0.9048	3.0	0.04%	26.7	0.06%
STAT6/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-2.021e-01	0.9048	295.0	4.10%	1827.7	4.31%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-1.951e-01	0.9048	674.0	9.37%	4105.5	9.69%
LXRE(NR/DR4)/BLRP(RAW)-LXRb-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-1.868e-01	0.9070	21.0	0.29%	149.6	0.35%
Mouse_Recombination_Hotspot/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-1.522e-01	0.9348	27.0	0.38%	192.0	0.45%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-1.519e-01	0.9348	8.0	0.11%	65.4	0.15%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer	TBGCACGCAA	1e0	-1.471e-01	0.9348	317.0	4.41%	1980.0	4.67%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-1.470e-01	0.9348	334.0	4.64%	2083.3	4.92%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-1.209e-01	0.9478	26.0	0.36%	190.6	0.45%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-1.166e-01	0.9478	40.0	0.56%	282.2	0.67%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	-5.860e-02	1.0000	21.0	0.29%	169.2	0.40%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-4.900e-02	1.0000	90.0	1.25%	626.4	1.48%
T1ISRE(IRF)/Ifnb-Exp/Homer	ACTTTCGTTTCT	1e0	-3.410e-02	1.0000	1.0	0.01%	20.0	0.05%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-3.395e-02	1.0000	281.0	3.91%	1837.2	4.34%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-3.109e-02	1.0000	554.0	7.70%	3517.3	8.30%
GFY-Staf/Promoters/Homer	RACTACAATTCCCAGAAKGC	1e0	-2.225e-02	1.0000	13.0	0.18%	125.4	0.30%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-1.843e-02	1.0000	24.0	0.33%	208.7	0.49%
VDR(NR/DR3)/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-8.384e-03	1.0000	107.0	1.49%	784.2	1.85%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-3.977e-03	1.0000	132.0	1.84%	967.7	2.28%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-2.664e-03	1.0000	10.0	0.14%	124.9	0.29%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-5.660e-04	1.0000	241.0	3.35%	1731.0	4.09%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-2.670e-04	1.0000	152.0	2.11%	1165.1	2.75%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-2.490e-04	1.0000	90.0	1.25%	745.1	1.76%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-0.000e+00	1.0000	51.0	0.71%	557.1	1.31%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-0.000e+00	1.0000	2784.0	38.71%	17693.0	41.75%