Information for motif12


Reverse Opposite:

p-value:1e-35
log p-value:-8.150e+01
Information Content per bp:1.602
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif4.86%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets103.8 +/- 55.2bp
Average Position of motif in Background26.6 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTGCTAGCTGTT
----CAGCTGTT

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CTGCTAGCTGTT
------GCTGTG

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTGCTAGCTGTT
--GCCATCTGTT

MA0461.1_Atoh1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTGCTAGCTGTT
--GCCATCTG--

MA0521.1_Tcf12/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGCTAGCTGTT
-NNGCAGCTGTT

PB0047.1_Myf6_1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTGCTAGCTGTT----
CNGACACCTGTTCNNN

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CTGCTAGCTGTT--
----BRRCVGTTDN

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTGCTAGCTGTT-
---HCAGCTGDTN

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTGCTAGCTGTT-
---ACAGCTGTTV

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CTGCTAGCTGTT
-----NGCTN--